
   20-Dec-2020 15:00:48 +0100

rootdir = ..\191108_Bob_HumanBlood1\
sampleName = H02_RT
measNums = 1 2 3 4 5 6 7 
frameNums = 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 606 cell sequences
cell traces covers the whole channel: 387 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 5
write results (382 cells):
----------
----------
382 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1778 cell sequences
cell traces covers the whole channel: 790 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 21
write results (769 cells):
----------
----------
769 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1584 cell sequences
cell traces covers the whole channel: 685 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 12
write results (673 cells):
----------
----------
673 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1414 cell sequences
cell traces covers the whole channel: 559 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 13
write results (546 cells):
----------
----------
546 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1626 cell sequences
cell traces covers the whole channel: 722 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 14
write results (708 cells):
----------
----------
708 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1518 cell sequences
cell traces covers the whole channel: 704 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 10
write results (694 cells):
----------
----------
694 cells written
Converting 'M7_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1416 cell sequences
cell traces covers the whole channel: 668 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 8
write results (660 cells):
----------
----------
660 cells written
measurement: ..\191108_Bob_HumanBlood1\H02_RT\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
1	606	387	382	382
2	1778	790	769	769
3	1584	685	673	673
4	1414	559	546	546
5	1626	722	708	708
6	1518	704	694	694
7	1416	668	660	660

   9-Mar-2022 23:25:04 +0100

rootdir = ..\191108_Bob_HumanBlood1\
sampleName = 191108_H02_8nlps_RT
measNums = 1 2 3 4 5 6 7 
frameNums = 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 606 cell sequences
cell traces covers the whole channel: 387 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 5
write results (382 cells):
----------
----------
382 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1778 cell sequences
cell traces covers the whole channel: 790 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 21
write results (769 cells):
----------
----------
769 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1584 cell sequences
cell traces covers the whole channel: 685 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 12
write results (673 cells):
----------
----------
673 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1414 cell sequences
cell traces covers the whole channel: 559 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 13
write results (546 cells):
----------
----------
546 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1626 cell sequences
cell traces covers the whole channel: 722 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 14
write results (708 cells):
----------
----------
708 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1518 cell sequences
cell traces covers the whole channel: 704 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 10
write results (694 cells):
----------
----------
694 cells written
Converting 'M7_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1416 cell sequences
cell traces covers the whole channel: 668 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 8
write results (660 cells):
----------
----------
660 cells written
measurement: ..\191108_Bob_HumanBlood1\191108_H02_8nlps_RT\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
1	606	387	382	382
2	1778	790	769	769
3	1584	685	673	673
4	1414	559	546	546
5	1626	722	708	708
6	1518	704	694	694
7	1416	668	660	660
